The Connect docs currently show a single JIRA startup command.
As noted in this Google group thread we don't have advice in our docs for developers wishing to develop against JIRA Agile. We also lack ServiceDesk and ServiceDesk + Agile commands.
Worse, I can't get JIRA Agile to work locally. I get the same behaviour as described in the thread above ("free trial" button sends me to http://localhost:2990/admin/rest/billing/1/product/greenhopper.jira.ondemand/activate, which 404s).
Even if I were to generate a command that works today it would get out of date, and manually updating it would obviously be terrible. What we need is an auto-updated set of commands similar to the existing startup command.